calcQuanLRcomparison {casesolver}R Documentation

calcQuanLRcomparison

Description

Function calculating LR using EuroForMix for remaining matches (from Step 1)

Usage

calcQuanLRcomparison(DBmix, DBref, matchlist, popFreq, kit, pC, lambda, threshT,
  nDone = 4, maxC = 3)

Arguments

DBmix

A matrix with evidence information (SampleName,Marker,Alleles,Heights)

DBref

A matrix with reference information (SampleName,Marker,Alleles)

matchlist

A matrix with overview of what references are matches each of samples (SampleName,Reference)

popFreq

A list of allele frequencies for a given population.

kit

Used to model degradation. Must be one of the shortnames of kit: "ESX17","ESI17","ESI17Fast","ESX17Fast","Y23","Identifiler","NGM","ESSPlex","ESSplexSE","NGMSElect","SGMPlus","ESX16", "Fusion","GlobalFiler".

pC

A numeric for allele drop-in probability. Default is 0.

lambda

Parameter in modeled peak height shifted exponential model. Default is 0.

threshT

The detection threshold given. Used when considering probability of allele drop-outs.

nDone

Maximum number of random evaluations nlm-optimizing routing. Default is 4.

maxC

Maximum number of contributors possible to assume. Default is 3.


[Package casesolver version 1.1.1 Index]